Difference between revisions of "TSS:Hg 102186.1"
From referenceTSS
| Line 3: | Line 3: | ||
|CD30LG= | |CD30LG= | ||
|TNLG3A= | |TNLG3A= | ||
| − | |all_trans= | + | |all_trans=HGNC:11938 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_001244 | |nearest_refseq=NM_001244 | ||
|nearest_unigene=Hs.494901 | |nearest_unigene=Hs.494901 | ||
| − | |num_trans= | + | |num_trans=944 |
|species=human | |species=human | ||
|start=114930274 | |start=114930274 | ||
| Line 31: | Line 31: | ||
|strand=- | |strand=- | ||
|tata_box=-34(GACTATATAAAG,-,0.00) | |tata_box=-34(GACTATATAAAG,-,0.00) | ||
| − | |transcript_name= | + | |transcript_name=AB590754 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102186.1 | |tss_id=hg_102186.1 | ||
Latest revision as of 18:21, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114930282 |
|---|---|
| End of the center position in the TSS region: | 114930283 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AB590754 |
|---|---|
| Distance: | -13 |
| Num_trans: | 944 |
| All_trans: | HGNC:11938 |
TATA-Box annotation
| Distance to TSS: | 313 |
|---|---|
| Nearest PromoterID: | NM_001244 |
| Entrez ID: | 944 |
| Nearest Unigene: | Hs.494901 |
| Nearest Refseq: | NM_001244 |
| Nearest Ensembl: | ENSG00000106952 |
| Gene Name: | TNF superfamily member 8 |
| Gene Alias: | CD153|CD30L|CD30LG|TNLG3A |
| Gene Description: | TNF superfamily member 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(GACTATATAAAG,-,0.00) |
