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Difference between revisions of "TSS:Hg 102325.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|MGC:10353=
 
|MGC:10353=
|all_trans=BC024145:248 U19261:251 BT019408:326 HQ447750:326 KJ897703:326 AB590501:326 CU692854:326 ENST00000373887.8:-385 NM_005658:-385 AK090468:-484
+
|all_trans=HGNC:12031
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 23: Line 23:
 
|nearest_refseq=NM_005658
 
|nearest_refseq=NM_005658
 
|nearest_unigene=Hs.531251
 
|nearest_unigene=Hs.531251
|num_trans=10
+
|num_trans=7185
 
|species=human
 
|species=human
 
|start=120926400
 
|start=120926400

Latest revision as of 18:24, 19 July 2021

Basic information about the TSS


TSS ID:hg_102325.1
Species:human
Chr:chr9
TSS Classification:no
Start:120926400
End:120926411
Strand:-
TSS Score:1
Start of the center position in the TSS region:120926405
End of the center position in the TSS region:120926406



Gene and protein annotation


Transcript_name:BC024145
Distance:248
GeneID:7185
HGNC/MGI_ID:HGNC:12031
UniProt_ID:
Gene_name:TNF receptor associated factor 1
Gene_symbol:TRAF1
Gene_synonyms:EBI6
Gene_source:HGNC:12031



Transcript annotation


Transcript_name:BC024145
Distance:248
Num_trans:7185
All_trans:HGNC:12031



TATA-Box annotation


Distance to TSS:390
Nearest PromoterID:NM_005658
Entrez ID:7185
Nearest Unigene:Hs.531251
Nearest Refseq:NM_005658
Nearest Ensembl:ENSG00000056558
Gene Name:TNF receptor associated factor 1
Gene Alias:EBI6|MGC:10353
Gene Description:TNF receptor associated factor 1
Gene Type:protein-coding
CpG%:0.02
GC%:0.527363
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):