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Difference between revisions of "TSS:Hg 10240.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000435891.5:39 AK000605:39 LF357439:-48 MA593016:-48 LF357440:50 MA593017:50
+
|all_trans=HGNC:17447
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.05
 
|cpg_percent=0.05
Line 22: Line 22:
 
|nearest_refseq=NM_005026
 
|nearest_refseq=NM_005026
 
|nearest_unigene=Hs.518451
 
|nearest_unigene=Hs.518451
|num_trans=6
+
|num_trans=22883
 
|species=human
 
|species=human
 
|start=9751619
 
|start=9751619

Latest revision as of 18:26, 19 July 2021

Basic information about the TSS


TSS ID:hg_10240.1
Species:human
Chr:chr1
TSS Classification:yes
Start:9751619
End:9751630
Strand:-
TSS Score:1
Start of the center position in the TSS region:9751624
End of the center position in the TSS region:9751625



Gene and protein annotation


Transcript_name:ENST00000435891.5 AK000605
Distance:39
GeneID:22883
HGNC/MGI_ID:HGNC:17447
UniProt_ID:Q5SR54
Gene_name:calsyntenin 1
Gene_symbol:CLSTN1
Gene_synonyms:CDHR12 CSTN1 KIAA0911
Gene_source:HGNC:17447



Transcript annotation


Transcript_name:ENST00000435891.5 AK000605
Distance:39
Num_trans:22883
All_trans:HGNC:17447



TATA-Box annotation


Distance to TSS:60158
Nearest PromoterID:NM_001350235
Entrez ID:5293
Nearest Unigene:Hs.518451
Nearest Refseq:NM_005026
Nearest Ensembl:ENSG00000171608
Gene Name:calsyntenin 1
Gene Alias:APDS|IMD14|P110DELTA|PI3K|p110D
Gene Description:phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
Gene Type:protein-coding
CpG%:0.05
GC%:0.507463
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):