Personal tools

Difference between revisions of "TSS:Hg 103192.1"

From referenceTSS

Jump to: navigation, search
 
Line 4: Line 4:
 
|LPAAB=
 
|LPAAB=
 
|LPAAT-beta=
 
|LPAAT-beta=
|all_trans=ENST00000371694.7:0 BC000026:0 AF011374:0 HM005456:0 ENST00000538402.1:1 U56418:1 AF000237:-2 BC019292:3 BC004529:4 ENST00000470861.1:32 ENST00000371696.7:-36 NM_001012727:-36 NM_006412:-36 LF383683:-38 MA619260:-38 DQ892146:38 DQ895342:38 KJ906048:39 KJ898240:39 KJ902127:39 KR710265:39
+
|all_trans=HGNC:325
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.145
 
|cpg_percent=0.145
Line 26: Line 26:
 
|nearest_refseq=NM_006412
 
|nearest_refseq=NM_006412
 
|nearest_unigene=Hs.320151
 
|nearest_unigene=Hs.320151
|num_trans=21
+
|num_trans=10555
 
|species=human
 
|species=human
 
|start=136687396
 
|start=136687396

Latest revision as of 18:43, 19 July 2021

Basic information about the TSS


TSS ID:hg_103192.1
Species:human
Chr:chr9
TSS Classification:yes
Start:136687396
End:136687421
Strand:-
TSS Score:1
Start of the center position in the TSS region:136687408
End of the center position in the TSS region:136687409



Gene and protein annotation


Transcript_name:ENST00000371694.7 BC000026 AF011374 HM005456
Distance:0
GeneID:10555
HGNC/MGI_ID:HGNC:325
UniProt_ID:A0A024R8F9
Gene_name:1-acylglycerol-3-phosphate O-acyltransferase 2
Gene_symbol:AGPAT2
Gene_synonyms:LPAAT-beta
Gene_source:HGNC:325



Transcript annotation


Transcript_name:ENST00000371694.7 BC000026 AF011374 HM005456
Distance:0
Num_trans:10555
All_trans:HGNC:325



TATA-Box annotation


Distance to TSS:48
Nearest PromoterID:NM_001012727
Entrez ID:10555
Nearest Unigene:Hs.320151
Nearest Refseq:NM_006412
Nearest Ensembl:ENSG00000169692
Gene Name:1-acylglycerol-3-phosphate O-acyltransferase 2
Gene Alias:1-AGPAT2|BSCL|BSCL1|LPAAB|LPAAT-beta
Gene Description:1-acylglycerol-3-phosphate O-acyltransferase 2
Gene Type:protein-coding
CpG%:0.145
GC%:0.79602
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):