Difference between revisions of "TSS:Hg 103993.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:23429 |
|bA2K17.3= | |bA2K17.3= | ||
|chr=chr10 | |chr=chr10 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001080836 | |nearest_refseq=NM_001080836 | ||
|nearest_unigene=Hs.257249 | |nearest_unigene=Hs.257249 | ||
| − | |num_trans= | + | |num_trans=644890 |
|species=human | |species=human | ||
|start=14959360 | |start=14959360 | ||
| Line 29: | Line 29: | ||
|strand=+ | |strand=+ | ||
|tata_box=-79(GCGCATAAAAGC,-,0.00) | |tata_box=-79(GCGCATAAAAGC,-,0.00) | ||
| − | |transcript_name=ENST00000407572.6 | + | |transcript_name=ENST00000407572.6 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103993.1 | |tss_id=hg_103993.1 | ||
Latest revision as of 19:00, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 14959379 |
|---|---|
| End of the center position in the TSS region: | 14959380 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000407572.6 |
|---|---|
| Distance: | 0 |
| Num_trans: | 644890 |
| All_trans: | HGNC:23429 |
TATA-Box annotation
| Distance to TSS: | -9 |
|---|---|
| Nearest PromoterID: | NR_147060 |
| Entrez ID: | 644890 |
| Nearest Unigene: | Hs.257249 |
| Nearest Refseq: | NM_001080836 |
| Nearest Ensembl: | ENSG00000197889 |
| Gene Name: | meiosis/spermiogenesis associated 1 |
| Gene Alias: | SPATA39|bA2K17.3 |
| Gene Description: | meiosis/spermiogenesis associated 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -79(GCGCATAAAAGC,-,0.00) |
