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Difference between revisions of "TSS:Hg 104136.1"

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Line 2: Line 2:
 
|CAVB2=
 
|CAVB2=
 
|MYSB=
 
|MYSB=
|all_trans=ENST00000651928.1:-2 ENST00000652478.1:-20 ENST00000643330.1:-22 AK295113:-22 AK299873:-27 ENST00000647168.2:-33 ENST00000651330.1:-33 ENST00000650685.1:-75 ENST00000377315.5:-134 NM_201570:-134 AK293937:307 AF423192:316
+
|all_trans=HGNC:1402
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.03
 
|cpg_percent=0.03
Line 24: Line 24:
 
|nearest_refseq=NM_000724
 
|nearest_refseq=NM_000724
 
|nearest_unigene=Hs.59093
 
|nearest_unigene=Hs.59093
|num_trans=12
+
|num_trans=783
 
|species=human
 
|species=human
 
|start=18400708
 
|start=18400708

Latest revision as of 19:03, 19 July 2021

Basic information about the TSS


TSS ID:hg_104136.1
Species:human
Chr:chr10
TSS Classification:yes
Start:18400708
End:18400716
Strand:+
TSS Score:1
Start of the center position in the TSS region:18400712
End of the center position in the TSS region:18400713



Gene and protein annotation


Transcript_name:ENST00000651928.1
Distance:-2
GeneID:783
HGNC/MGI_ID:HGNC:1402
UniProt_ID:A0A494C1Q6
Gene_name:calcium voltage-gated channel auxiliary subunit beta 2
Gene_symbol:CACNB2
Gene_synonyms:
Gene_source:HGNC:1402



Transcript annotation


Transcript_name:ENST00000651928.1
Distance:-2
Num_trans:783
All_trans:HGNC:1402



TATA-Box annotation


Distance to TSS:137
Nearest PromoterID:NM_201570
Entrez ID:783
Nearest Unigene:Hs.59093
Nearest Refseq:NM_000724
Nearest Ensembl:ENSG00000165995
Gene Name:calcium voltage-gated channel auxiliary subunit beta 2
Gene Alias:CACNLB2|CAVB2|MYSB
Gene Description:calcium voltage-gated channel auxiliary subunit beta 2
Gene Type:protein-coding
CpG%:0.03
GC%:0.323383
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):