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Difference between revisions of "TSS:Hg 104455.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|WARBM3=
 
|WARBM3=
|all_trans=AK223153:1 ENST00000375802.7:-3 AL136734:-9 AF274957:9 BC015014:-11 AF087860:-15 ENST00000621805.4:24 AF136974:-24 AB464117:24 AM393142:24 BT009840:24 CU677165:24 AF498950:24 CR533455:24 AF137372:24 AK001555:24 ENST00000356940.11:-27 NM_021252:-27 NM_001256415:-27 NM_001256412:-27 NM_001256411:-27 NM_001256410:-27 NR_046172:-27 AK297629:-27 AK299457:-27 AK295443:-27 BC029350:-27 ENST00000465772.5:31 ENST00000490236.2:-32 AY574034:-45 ENST00000484281.1:48 LP895194:-63 ENST00000535776.5:-157 ENST00000611151.4:-157 ENST00000423465.1:273
+
|all_trans=HGNC:14244
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.08
 
|cpg_percent=0.08
Line 23: Line 23:
 
|nearest_refseq=NM_021252
 
|nearest_refseq=NM_021252
 
|nearest_unigene=Hs.406799
 
|nearest_unigene=Hs.406799
|num_trans=35
+
|num_trans=22931
 
|species=human
 
|species=human
 
|start=27504330
 
|start=27504330

Latest revision as of 19:10, 19 July 2021

Basic information about the TSS


TSS ID:hg_104455.1
Species:human
Chr:chr10
TSS Classification:yes
Start:27504330
End:27504346
Strand:+
TSS Score:1
Start of the center position in the TSS region:27504338
End of the center position in the TSS region:27504339



Gene and protein annotation


Transcript_name:AK223153
Distance:1
GeneID:22931
HGNC/MGI_ID:HGNC:14244
UniProt_ID:
Gene_name:RAB18, member RAS oncogene family
Gene_symbol:RAB18
Gene_synonyms:
Gene_source:HGNC:14244



Transcript annotation


Transcript_name:AK223153
Distance:1
Num_trans:22931
All_trans:HGNC:14244



TATA-Box annotation


Distance to TSS:34
Nearest PromoterID:NR_046172
Entrez ID:22931
Nearest Unigene:Hs.406799
Nearest Refseq:NM_021252
Nearest Ensembl:ENSG00000099246
Gene Name:RAB18, member RAS oncogene family
Gene Alias:RAB18LI1|WARBM3
Gene Description:RAB18, member RAS oncogene family
Gene Type:protein-coding
CpG%:0.08
GC%:0.661692
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):