Difference between revisions of "TSS:Hg 104818.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:17167 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_031912 | |nearest_refseq=NM_031912 | ||
|nearest_unigene=Hs.696346 | |nearest_unigene=Hs.696346 | ||
| − | |num_trans= | + | |num_trans=83849 |
|species=human | |species=human | ||
|start=46579113 | |start=46579113 | ||
| Line 29: | Line 29: | ||
|sytXV= | |sytXV= | ||
|tata_box=-32(CGCTTTAAGAGA,-,0.00),-31(GCTTTAAGAGAC,+,0.00) | |tata_box=-32(CGCTTTAAGAGA,-,0.00),-31(GCTTTAAGAGAC,+,0.00) | ||
| − | |transcript_name=ENST00000374321.9 ENST00000503753.5 | + | |transcript_name=ENST00000374321.9 ENST00000503753.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104818.1 | |tss_id=hg_104818.1 | ||
Latest revision as of 19:18, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 46579127 |
|---|---|
| End of the center position in the TSS region: | 46579128 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000374321.9 ENST00000503753.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 83849 |
| All_trans: | HGNC:17167 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_031912 |
| Entrez ID: | 83849 |
| Nearest Unigene: | Hs.696346 |
| Nearest Refseq: | NM_031912 |
| Nearest Ensembl: | ENSG00000204176 |
| Gene Name: | synaptotagmin 15 |
| Gene Alias: | CHR10SYT|sytXV |
| Gene Description: | synaptotagmin 15 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(CGCTTTAAGAGA,-,0.00),-31(GCTTTAAGAGAC,+,0.00) |
