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Difference between revisions of "TSS:Hg 104885.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AL833265:-25 ENST00000470615.1:37 ENST00000374144.8:-48 NM_001135196:-48 AK127811:-76
+
|all_trans=HGNC:26973
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.04
 
|cpg_percent=0.04
Line 22: Line 22:
 
|nearest_refseq=NM_199459
 
|nearest_refseq=NM_199459
 
|nearest_unigene=Hs.585480
 
|nearest_unigene=Hs.585480
|num_trans=5
+
|num_trans=118461
 
|species=human
 
|species=human
 
|start=49299217
 
|start=49299217

Latest revision as of 19:19, 19 July 2021

Basic information about the TSS


TSS ID:hg_104885.1
Species:human
Chr:chr10
TSS Classification:yes
Start:49299217
End:49299237
Strand:+
TSS Score:1
Start of the center position in the TSS region:49299227
End of the center position in the TSS region:49299228



Gene and protein annotation


Transcript_name:AL833265
Distance:-25
GeneID:118461
HGNC/MGI_ID:HGNC:26973
UniProt_ID:
Gene_name:chromosome 10 open reading frame 71
Gene_symbol:C10orf71
Gene_synonyms:FLJ45913
Gene_source:HGNC:26973



Transcript annotation


Transcript_name:AL833265
Distance:-25
Num_trans:118461
All_trans:HGNC:26973



TATA-Box annotation


Distance to TSS:57
Nearest PromoterID:NM_001135196
Entrez ID:118461
Nearest Unigene:Hs.585480
Nearest Refseq:NM_199459
Nearest Ensembl:ENSG00000177354
Gene Name:chromosome 10 open reading frame 71
Gene Alias:CEFIP
Gene Description:chromosome 10 open reading frame 71
Gene Type:protein-coding
CpG%:0.04
GC%:0.547264
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):