Personal tools

Difference between revisions of "TSS:Hg 104893.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|VACHT=
 
|VACHT=
|all_trans=U09210:49 ENST00000374115.5:58 NM_003055:58 BC007765:123 AK313094:160 CU675799:486 JF432245:486 KJ897576:486
+
|all_trans=HGNC:10936
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.13
 
|cpg_percent=0.13
Line 23: Line 23:
 
|nearest_refseq=NM_003055
 
|nearest_refseq=NM_003055
 
|nearest_unigene=Hs.654374
 
|nearest_unigene=Hs.654374
|num_trans=8
+
|num_trans=6572
 
|species=human
 
|species=human
 
|start=49610242
 
|start=49610242

Latest revision as of 19:19, 19 July 2021

Basic information about the TSS


TSS ID:hg_104893.1
Species:human
Chr:chr10
TSS Classification:yes
Start:49610242
End:49610252
Strand:+
TSS Score:1
Start of the center position in the TSS region:49610247
End of the center position in the TSS region:49610248



Gene and protein annotation


Transcript_name:U09210
Distance:49
GeneID:6572
HGNC/MGI_ID:HGNC:10936
UniProt_ID:
Gene_name:solute carrier family 18 member A3
Gene_symbol:SLC18A3
Gene_synonyms:VACHT
Gene_source:HGNC:10936



Transcript annotation


Transcript_name:U09210
Distance:49
Num_trans:6572
All_trans:HGNC:10936



TATA-Box annotation


Distance to TSS:-63
Nearest PromoterID:NM_003055
Entrez ID:6572
Nearest Unigene:Hs.654374
Nearest Refseq:NM_003055
Nearest Ensembl:ENSG00000187714
Gene Name:solute carrier family 18 member A3
Gene Alias:CMS21|VACHT
Gene Description:solute carrier family 18 member A3
Gene Type:protein-coding
CpG%:0.13
GC%:0.741294
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):