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Difference between revisions of "TSS:Hg 105404.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|SPL=
 
|SPL=
|all_trans=AJ011304:-1 AB033078:-63 ENST00000486993.1:-72 BC051238:-72 BC068061:-72 BC052991:-73 ENST00000373202.8:-85 NM_003901:-85 LF385457:-85 MA621034:-85 LF208760:-86 MA444337:-86 LF322579:167 MA558156:167 LF322578:287 MA558155:287 AK314615:343 LF322577:359 MA558154:359
+
|all_trans=HGNC:10817
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.115
 
|cpg_percent=0.115
Line 23: Line 23:
 
|nearest_refseq=NM_003901
 
|nearest_refseq=NM_003901
 
|nearest_unigene=Hs.499984
 
|nearest_unigene=Hs.499984
|num_trans=19
+
|num_trans=8879
 
|species=human
 
|species=human
 
|start=70816032
 
|start=70816032

Latest revision as of 19:30, 19 July 2021

Basic information about the TSS


TSS ID:hg_105404.1
Species:human
Chr:chr10
TSS Classification:yes
Start:70816032
End:70816041
Strand:+
TSS Score:1
Start of the center position in the TSS region:70816036
End of the center position in the TSS region:70816037



Gene and protein annotation


Transcript_name:AJ011304
Distance:-1
GeneID:8879
HGNC/MGI_ID:HGNC:10817
UniProt_ID:
Gene_name:sphingosine-1-phosphate lyase 1
Gene_symbol:SGPL1
Gene_synonyms:SPL
Gene_source:HGNC:10817



Transcript annotation


Transcript_name:AJ011304
Distance:-1
Num_trans:8879
All_trans:HGNC:10817



TATA-Box annotation


Distance to TSS:89
Nearest PromoterID:NM_003901
Entrez ID:8879
Nearest Unigene:Hs.499984
Nearest Refseq:NM_003901
Nearest Ensembl:ENSG00000166224
Gene Name:sphingosine-1-phosphate lyase 1
Gene Alias:NPHS14|S1PL|SPL
Gene Description:sphingosine-1-phosphate lyase 1
Gene Type:protein-coding
CpG%:0.115
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):