Difference between revisions of "TSS:Hg 105844.1"
From referenceTSS
| Line 28: | Line 28: | ||
|strand=+ | |strand=+ | ||
|tata_box=-41(GGCTTTTAAAAG,-,0.00),-40(GCTTTTAAAAGA,+,0.00),-40(GCTTTTAAAAGA,-,0.00),-39(CTTTTAAAAGAT,+,0.00) | |tata_box=-41(GGCTTTTAAAAG,-,0.00),-40(GCTTTTAAAAGA,+,0.00),-40(GCTTTTAAAAGA,-,0.00),-39(CTTTTAAAAGAT,+,0.00) | ||
| − | |transcript_name=NR_138551 | + | |transcript_name=NR_138551.2 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_105844.1 | |tss_id=hg_105844.1 | ||
Latest revision as of 19:39, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 80131668 |
|---|---|
| End of the center position in the TSS region: | 80131669 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NR_138551.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | NR_138551:0 ENST00000372270.6:5 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NR_138551 |
| Entrez ID: | 219348 |
| Nearest Unigene: | Hs.204947 |
| Nearest Refseq: | NM_001012973 |
| Nearest Ensembl: | ENSG00000189129 |
| Gene Name: | placenta associated 9 |
| Gene Alias: | - |
| Gene Description: | placenta associated 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -41(GGCTTTTAAAAG,-,0.00),-40(GCTTTTAAAAGA,+,0.00),-40(GCTTTTAAAAGA,-,0.00),-39(CTTTTAAAAGAT,+,0.00) |
