Difference between revisions of "TSS:Hg 106464.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|SPG33= | |SPG33= | ||
| − | |all_trans= | + | |all_trans=HGNC:26559 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_144588 | |nearest_refseq=NM_144588 | ||
|nearest_unigene=Hs.744075 | |nearest_unigene=Hs.744075 | ||
| − | |num_trans= | + | |num_trans=118813 |
|species=human | |species=human | ||
|start=97737115 | |start=97737115 | ||
|start_of_center_position=97737156 | |start_of_center_position=97737156 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000337540.11 ENST00000370613.7 ENST00000370610.7 ENST00000357540.8 ENST00000393677.8 ENST00000423811.3 ENST00000359980.5 ENST00000462887.1 | + | |transcript_name=ENST00000337540.11 ENST00000370613.7 ENST00000370610.7 ENST00000357540.8 ENST00000393677.8 ENST00000423811.3 ENST00000359980.5 ENST00000462887.1 AK296295 AK057481 AK300438 AK299735 AK097945 BC030621 AK074876 AK296588 BX647836 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106464.1 | |tss_id=hg_106464.1 | ||
Latest revision as of 19:53, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 97737156 |
|---|---|
| End of the center position in the TSS region: | 97737157 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000337540.11 ENST00000370613.7 ENST00000370610.7 ENST00000357540.8 ENST00000393677.8 ENST00000423811.3 ENST00000359980.5 ENST00000462887.1 AK296295 AK057481 AK300438 AK299735 AK097945 BC030621 AK074876 AK296588 BX647836 |
|---|---|
| Distance: | 0 |
| Num_trans: | 118813 |
| All_trans: | HGNC:26559 |
TATA-Box annotation
| Distance to TSS: | 28 |
|---|---|
| Nearest PromoterID: | NM_144588 |
| Entrez ID: | 118813 |
| Nearest Unigene: | Hs.744075 |
| Nearest Refseq: | NM_144588 |
| Nearest Ensembl: | ENSG00000155256 |
| Gene Name: | zinc finger FYVE-type containing 27 |
| Gene Alias: | PROTRUDIN|SPG33 |
| Gene Description: | zinc finger FYVE-type containing 27 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
