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Difference between revisions of "TSS:Hg 134522.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|TFIIIA=
 
|TFIIIA=
|all_trans=ENST00000438571.5:-19 AB590496:20 U14134:30 U20272:30 ENST00000419181.5:-33 ENST00000466776.5:52 ENST00000435781.5:-57 ENST00000381140.10:-76 NM_002097:-76 D32257:-151 BC143711:-217
+
|all_trans=HGNC:4662
 
|chr=chr13
 
|chr=chr13
 
|cpg_percent=0.175
 
|cpg_percent=0.175
Line 23: Line 23:
 
|nearest_refseq=NM_002097
 
|nearest_refseq=NM_002097
 
|nearest_unigene=Hs.445977
 
|nearest_unigene=Hs.445977
|num_trans=11
+
|num_trans=2971
 
|species=human
 
|species=human
 
|start=27424694
 
|start=27424694

Latest revision as of 06:04, 20 July 2021

Basic information about the TSS


TSS ID:hg_134522.1
Species:human
Chr:chr13
TSS Classification:yes
Start:27424694
End:27424714
Strand:+
TSS Score:1
Start of the center position in the TSS region:27424704
End of the center position in the TSS region:27424705



Gene and protein annotation


Transcript_name:ENST00000438571.5
Distance:-19
GeneID:2971
HGNC/MGI_ID:HGNC:4662
UniProt_ID:H7BZ51
Gene_name:general transcription factor IIIA
Gene_symbol:GTF3A
Gene_synonyms:AP2 TFIIIA
Gene_source:HGNC:4662



Transcript annotation


Transcript_name:ENST00000438571.5
Distance:-19
Num_trans:2971
All_trans:HGNC:4662



TATA-Box annotation


Distance to TSS:85
Nearest PromoterID:NM_002097
Entrez ID:2971
Nearest Unigene:Hs.445977
Nearest Refseq:NM_002097
Nearest Ensembl:ENSG00000122034
Gene Name:general transcription factor IIIA
Gene Alias:AP2|TFIIIA
Gene Description:general transcription factor IIIA
Gene Type:protein-coding
CpG%:0.175
GC%:0.751244
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):