Personal tools

Difference between revisions of "TSS:Hg 138452.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|RNS4=
 
|RNS4=
|all_trans=AK092422:0 LF384987:0 MA620564:0 ENST00000336811.10:-23 NM_001145:-23 FJ236304:-23 BX247985:184 ENST00000555835.3:321 NM_001282193:321 NM_001282192:321 NM_002937:321 NM_001385271:321 NM_001385273:321 ENST00000397995.2:344 ENST00000553909.1:348 AK313989:352 BC015520:365 GQ900976:365 ENST00000554073.1:375 BC054880:375 LF334359:389 MA569936:389 BX248010:420
+
|all_trans=HGNC:10047
 
|chr=chr14
 
|chr=chr14
 
|cpg_percent=0.04
 
|cpg_percent=0.04
Line 23: Line 23:
 
|nearest_refseq=NM_001145
 
|nearest_refseq=NM_001145
 
|nearest_unigene=Hs.283749
 
|nearest_unigene=Hs.283749
|num_trans=23
+
|num_trans=6038
 
|species=human
 
|species=human
 
|start=20684199
 
|start=20684199
 
|start_of_center_position=20684219
 
|start_of_center_position=20684219
 
|strand=+
 
|strand=+
|transcript_name=AK092422 LF384987 MA620564
+
|transcript_name=AK092422
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_138452.1
 
|tss_id=hg_138452.1

Latest revision as of 07:29, 20 July 2021

Basic information about the TSS


TSS ID:hg_138452.1
Species:human
Chr:chr14
TSS Classification:yes
Start:20684199
End:20684239
Strand:+
TSS Score:1
Start of the center position in the TSS region:20684219
End of the center position in the TSS region:20684220



Gene and protein annotation


Transcript_name:AK092422
Distance:0
GeneID:6038
HGNC/MGI_ID:HGNC:10047
UniProt_ID:
Gene_name:ribonuclease A family member 4
Gene_symbol:RNASE4
Gene_synonyms:RAB1
Gene_source:HGNC:10047



Transcript annotation


Transcript_name:AK092422
Distance:0
Num_trans:6038
All_trans:HGNC:10047



TATA-Box annotation


Distance to TSS:42
Nearest PromoterID:NM_001145
Entrez ID:283
Nearest Unigene:Hs.283749
Nearest Refseq:NM_001145
Nearest Ensembl:ENSG00000214274
Gene Name:ribonuclease A family member 4
Gene Alias:ALS9|HEL168|RAA1|RNASE4|RNASE5
Gene Description:angiogenin
Gene Type:protein-coding
CpG%:0.04
GC%:0.517413
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):