Difference between revisions of "TSS:Hg 100798.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-33 |entrez_id=101927015 |gc_percent=0.477612 |gene_alias=- |gene_description=long intergenic non-protein coding RNA 1506 |gene_...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NR_109769:28 ENST00000446290.1:41 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=28 | ||
|distance_to_tss=-33 | |distance_to_tss=-33 | ||
| + | |end=68546640 | ||
| + | |end_of_center_position=68546635 | ||
|entrez_id=101927015 | |entrez_id=101927015 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=long intergenic non-protein coding RNA 1506 | |gene_description=long intergenic non-protein coding RNA 1506 | ||
| − | |gene_name=LINC01506 | + | |gene_id=101927015 |
| + | |gene_name=long intergenic non-protein coding RNA 1506 | ||
| + | |gene_source=HGNC:51187 | ||
| + | |gene_symbol=LINC01506 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:51187 | ||
|nearest_ensembl=ENSG00000234506 | |nearest_ensembl=ENSG00000234506 | ||
|nearest_promoter_id=NR_109769 | |nearest_promoter_id=NR_109769 | ||
|nearest_refseq=NR_109769 | |nearest_refseq=NR_109769 | ||
|nearest_unigene=Hs.406454 | |nearest_unigene=Hs.406454 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=68546629 | ||
| + | |start_of_center_position=68546634 | ||
| + | |strand=- | ||
| + | |transcript_name=NR_109769.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100798.1 | |tss_id=hg_100798.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:51, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68546634 |
|---|---|
| End of the center position in the TSS region: | 68546635 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_109769.1 |
|---|---|
| Distance: | 28 |
| Num_trans: | 2 |
| All_trans: | NR_109769:28 ENST00000446290.1:41 |
TATA-Box annotation
| Distance to TSS: | -33 |
|---|---|
| Nearest PromoterID: | NR_109769 |
| Entrez ID: | 101927015 |
| Nearest Unigene: | Hs.406454 |
| Nearest Refseq: | NR_109769 |
| Nearest Ensembl: | ENSG00000234506 |
| Gene Name: | long intergenic non-protein coding RNA 1506 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1506 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
