Difference between revisions of "TSS:Hg 180314.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NR_003603:22 ENST00000598671.1:44 |chr=chr19 |cpg_percent=0.005 |distance=22 |distance_to_tss=-26 |end=24163477 |entrez_id=100101266 |gc_percent=0.48756...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-26 | |distance_to_tss=-26 | ||
|end=24163477 | |end=24163477 | ||
| + | |end_of_center_position=24163473 | ||
|entrez_id=100101266 | |entrez_id=100101266 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=24163468 | |start=24163468 | ||
| + | |start_of_center_position=24163472 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-46(CCATTTAAAGCC,+,0.00) |
| − | |transcript_name=NR_003603 | + | |transcript_name=NR_003603.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_180314.1 | |tss_id=hg_180314.1 | ||
Latest revision as of 22:43, 20 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 24163472 |
|---|---|
| End of the center position in the TSS region: | 24163473 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NR_003603.1 |
|---|---|
| Distance: | 22 |
| Num_trans: | 2 |
| All_trans: | NR_003603:22 ENST00000598671.1:44 |
TATA-Box annotation
| Distance to TSS: | -26 |
|---|---|
| Nearest PromoterID: | NR_003603 |
| Entrez ID: | 100101266 |
| Nearest Unigene: | Hs.149312 |
| Nearest Refseq: | NR_003603 |
| Nearest Ensembl: | ENSG00000268442 |
| Gene Name: | hepatitis A virus cellular receptor 1 pseudogene 1 |
| Gene Alias: | - |
| Gene Description: | hepatitis A virus cellular receptor 1 pseudogene 1 |
| Gene Type: | pseudo |
| CpG%: | 0.005 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -46(CCATTTAAAGCC,+,0.00) |
