Difference between revisions of "TSS:Hg 100805.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=1145 |entrez_id=9414 |gc_percent=0.487562 |gene_alias=C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 |gene_description=tight junc...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |DFNA51= | ||
| + | |DUP9q21.11= | ||
| + | |PFIC4= | ||
| + | |X104= | ||
| + | |ZO2= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=923 | ||
| + | |end=69175205 | ||
| + | |end_of_center_position=69175200 | ||
|entrez_id=9414 | |entrez_id=9414 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| − | |gene_alias=C9DUPq21.11 | + | |gene_alias=C9DUPq21.11{{!}}DFNA51{{!}}DUP9q21.11{{!}}PFIC4{{!}}X104{{!}}ZO2 |
|gene_description=tight junction protein 2 | |gene_description=tight junction protein 2 | ||
|gene_name=TJP2 | |gene_name=TJP2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000119139 | |nearest_ensembl=ENSG00000119139 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001369872 |
|nearest_refseq=NM_004817 | |nearest_refseq=NM_004817 | ||
|nearest_unigene=Hs.50382 | |nearest_unigene=Hs.50382 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=69175194 | ||
| + | |start_of_center_position=69175199 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_100805.1 | |tss_id=hg_100805.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:25, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 69175199 |
|---|---|
| End of the center position in the TSS region: | 69175200 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 923 |
|---|---|
| Nearest PromoterID: | NM_001369872 |
| Entrez ID: | 9414 |
| Nearest Unigene: | Hs.50382 |
| Nearest Refseq: | NM_004817 |
| Nearest Ensembl: | ENSG00000119139 |
| Gene Name: | TJP2 |
| Gene Alias: | C9DUPq21.11|DFNA51|DUP9q21.11|PFIC4|X104|ZO2 |
| Gene Description: | tight junction protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
