Difference between revisions of "TSS:Hg 184418.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=CR456843:-105 EU832091:-105 EU832183:-105 J02854:-134 | + | |MLC-2C= |
| + | |MLC2= | ||
| + | |MRLC1= | ||
| + | |MYRL2= | ||
| + | |all_trans=LF350371:-59 MA585948:-59 CR456843:-105 EU832091:-105 EU832183:-105 GQ891335:-105 J02854:-134 | ||
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance=- | + | |distance=-59 |
| − | |distance_to_tss= | + | |distance_to_tss=3477 |
|end=36545002 | |end=36545002 | ||
| + | |end_of_center_position=36544996 | ||
|entrez_id=10398 | |entrez_id=10398 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=LC20 | + | |gene_alias=LC20{{!}}MLC-2C{{!}}MLC2{{!}}MRLC1{{!}}MYRL2 |
|gene_description=myosin light chain 9 | |gene_description=myosin light chain 9 | ||
|gene_id=10398 | |gene_id=10398 | ||
| − | |gene_name= | + | |gene_name=MYL9 |
|gene_source=HGNC:15754 | |gene_source=HGNC:15754 | ||
|gene_symbol=MYL9 | |gene_symbol=MYL9 | ||
| Line 18: | Line 23: | ||
|hgnc_mgi_id=HGNC:15754 | |hgnc_mgi_id=HGNC:15754 | ||
|nearest_ensembl=ENSG00000101335 | |nearest_ensembl=ENSG00000101335 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_006097 |
|nearest_refseq=NM_006097 | |nearest_refseq=NM_006097 | ||
|nearest_unigene=Hs.504687 | |nearest_unigene=Hs.504687 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=36544989 | |start=36544989 | ||
| + | |start_of_center_position=36544995 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF350371 MA585948 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_184418.1 | |tss_id=hg_184418.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q6IBG1 | |uniprot_id=Q6IBG1 | ||
}} | }} | ||
Latest revision as of 22:15, 13 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 36544995 |
|---|---|
| End of the center position in the TSS region: | 36544996 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF350371 MA585948 |
|---|---|
| Distance: | -59 |
| Num_trans: | 7 |
| All_trans: | LF350371:-59 MA585948:-59 CR456843:-105 EU832091:-105 EU832183:-105 GQ891335:-105 J02854:-134 |
TATA-Box annotation
| Distance to TSS: | 3477 |
|---|---|
| Nearest PromoterID: | NM_006097 |
| Entrez ID: | 10398 |
| Nearest Unigene: | Hs.504687 |
| Nearest Refseq: | NM_006097 |
| Nearest Ensembl: | ENSG00000101335 |
| Gene Name: | MYL9 |
| Gene Alias: | LC20|MLC-2C|MLC2|MRLC1|MYRL2 |
| Gene Description: | myosin light chain 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
