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Difference between revisions of "TSS:Hg 196298.1"

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Line 3: Line 3:
 
|JM21=
 
|JM21=
 
|PPP1R90=
 
|PPP1R90=
|all_trans=ENST00000493923.1:0 ENST00000647398.1:-20 ENST00000468949.1:-128 AK303012:-128 BC013737:-197 BT006649:-215 AB385398:-215 AF132609:-215 KJ902051:-217 NR_135591:-245 ENST00000440653.1:-358 ENST00000443563.5:-393
+
|all_trans=HGNC:14064
 
|chr=chrX
 
|chr=chrX
 
|cpg_percent=0.03
 
|cpg_percent=0.03
Line 25: Line 25:
 
|nearest_refseq=NM_006044
 
|nearest_refseq=NM_006044
 
|nearest_unigene=Hs.6764
 
|nearest_unigene=Hs.6764
|num_trans=12
+
|num_trans=10013
 
|species=human
 
|species=human
 
|start=48802907
 
|start=48802907

Latest revision as of 04:28, 21 July 2021

Basic information about the TSS


TSS ID:hg_196298.1
Species:human
Chr:chrX
TSS Classification:yes
Start:48802907
End:48802918
Strand:+
TSS Score:1
Start of the center position in the TSS region:48802912
End of the center position in the TSS region:48802913



Gene and protein annotation


Transcript_name:ENST00000493923.1
Distance:0
GeneID:10013
HGNC/MGI_ID:HGNC:14064
UniProt_ID:
Gene_name:histone deacetylase 6
Gene_symbol:HDAC6
Gene_synonyms:FLJ16239 HD6 JM21 KIAA0901 PPP1R90
Gene_source:HGNC:14064



Transcript annotation


Transcript_name:ENST00000493923.1
Distance:0
Num_trans:10013
All_trans:HGNC:14064



TATA-Box annotation


Distance to TSS:250
Nearest PromoterID:NR_135591
Entrez ID:10013
Nearest Unigene:Hs.6764
Nearest Refseq:NM_006044
Nearest Ensembl:ENSG00000094631
Gene Name:histone deacetylase 6
Gene Alias:CPBHM|HD6|JM21|PPP1R90
Gene Description:histone deacetylase 6
Gene Type:protein-coding
CpG%:0.03
GC%:0.522388
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):