Difference between revisions of "TSS:Hg 184900.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK000531:-175 AL591565:-177 BC001105:-187 BC012818:-187 ENST00000360981.8:-262 uc002xoc.4:-262 AJ276469:-262 AK026642:-268 ENST00000372717.5:-293 NM_001...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |CK1BP= |
| + | |HSMNP1= | ||
| + | |all_trans=HGNC:15881 | ||
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=298 | |distance_to_tss=298 | ||
|end=45406892 | |end=45406892 | ||
| + | |end_of_center_position=45406887 | ||
|entrez_id=55861 | |entrez_id=55861 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=C20orf35 | + | |gene_alias=C20orf35{{!}}CK1BP{{!}}HSMNP1 |
|gene_description=dysbindin domain containing 2 | |gene_description=dysbindin domain containing 2 | ||
|gene_id=55861 | |gene_id=55861 | ||
| − | |gene_name=dysbindin | + | |gene_name=dysbindin domain containing 2 |
|gene_source=HGNC:15881 | |gene_source=HGNC:15881 | ||
|gene_symbol=DBNDD2 | |gene_symbol=DBNDD2 | ||
| Line 18: | Line 21: | ||
|hgnc_mgi_id=HGNC:15881 | |hgnc_mgi_id=HGNC:15881 | ||
|nearest_ensembl=ENSG00000244274 | |nearest_ensembl=ENSG00000244274 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001048223 |
|nearest_refseq=NM_018478 | |nearest_refseq=NM_018478 | ||
|nearest_unigene=Hs.730643 | |nearest_unigene=Hs.730643 | ||
| − | |num_trans= | + | |num_trans=55861 |
|species=human | |species=human | ||
|start=45406880 | |start=45406880 | ||
| + | |start_of_center_position=45406886 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-35(CCCTTTTTAGGG,-,0.00),-33(CTTTTTAGGGAA,+,0.00) |
|transcript_name=AK000531 | |transcript_name=AK000531 | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 00:23, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 45406886 |
|---|---|
| End of the center position in the TSS region: | 45406887 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK000531 |
|---|---|
| Distance: | -175 |
| Num_trans: | 55861 |
| All_trans: | HGNC:15881 |
TATA-Box annotation
| Distance to TSS: | 298 |
|---|---|
| Nearest PromoterID: | NM_001048223 |
| Entrez ID: | 55861 |
| Nearest Unigene: | Hs.730643 |
| Nearest Refseq: | NM_018478 |
| Nearest Ensembl: | ENSG00000244274 |
| Gene Name: | dysbindin domain containing 2 |
| Gene Alias: | C20orf35|CK1BP|HSMNP1 |
| Gene Description: | dysbindin domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(CCCTTTTTAGGG,-,0.00),-33(CTTTTTAGGGAA,+,0.00) |
