Personal tools

Difference between revisions of "TSS:Hg 2029.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|DYT2=
 
|DYT2=
|all_trans=ENST00000470166.5:-38 ENST00000480118.5:40 ENST00000459874.5:420 DQ426877:440 ENST00000373467.4:449 NM_002143:449 AK313907:451 BC001777:455
+
|all_trans=HGNC:5144
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.06
 
|cpg_percent=0.06
Line 23: Line 23:
 
|nearest_refseq=NM_002143
 
|nearest_refseq=NM_002143
 
|nearest_unigene=Hs.632391
 
|nearest_unigene=Hs.632391
|num_trans=8
+
|num_trans=3208
 
|species=human
 
|species=human
 
|start=32886031
 
|start=32886031

Latest revision as of 06:21, 21 July 2021

Basic information about the TSS


TSS ID:hg_2029.1
Species:human
Chr:chr1
TSS Classification:yes
Start:32886031
End:32886042
Strand:+
TSS Score:1
Start of the center position in the TSS region:32886036
End of the center position in the TSS region:32886037



Gene and protein annotation


Transcript_name:ENST00000470166.5
Distance:-38
GeneID:3208
HGNC/MGI_ID:HGNC:5144
UniProt_ID:
Gene_name:hippocalcin
Gene_symbol:HPCA
Gene_synonyms:
Gene_source:HGNC:5144



Transcript annotation


Transcript_name:ENST00000470166.5
Distance:-38
Num_trans:3208
All_trans:HGNC:5144



TATA-Box annotation


Distance to TSS:-454
Nearest PromoterID:NM_002143
Entrez ID:3208
Nearest Unigene:Hs.632391
Nearest Refseq:NM_002143
Nearest Ensembl:ENSG00000121905
Gene Name:hippocalcin
Gene Alias:BDR2|DYT2
Gene Description:hippocalcin
Gene Type:protein-coding
CpG%:0.06
GC%:0.661692
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):