Difference between revisions of "TSS:Hg 100853.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
+ | |BTEB1= | ||
+ | |all_trans=LF345226:-28 MA580803:-28 LF345227:128 MA580804:128 LF345228:450 MA580805:450 BC069431:462 AK313631:462 BC074879:487 BC074880:487 | ||
+ | |chr=chr9 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
+ | |distance=-28 | ||
|distance_to_tss=718 | |distance_to_tss=718 | ||
+ | |end=70413979 | ||
+ | |end_of_center_position=70413939 | ||
|entrez_id=687 | |entrez_id=687 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
− | |gene_alias=BTEB | + | |gene_alias=BTEB{{!}}BTEB1 |
|gene_description=Kruppel like factor 9 | |gene_description=Kruppel like factor 9 | ||
+ | |gene_id=687 | ||
|gene_name=KLF9 | |gene_name=KLF9 | ||
+ | |gene_source=HGNC:1123 | ||
+ | |gene_symbol=KLF9 | ||
+ | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
+ | |hgnc_mgi_id=HGNC:1123 | ||
|nearest_ensembl=ENSG00000119138 | |nearest_ensembl=ENSG00000119138 | ||
|nearest_promoter_id=NM_001206 | |nearest_promoter_id=NM_001206 | ||
|nearest_refseq=NM_001206 | |nearest_refseq=NM_001206 | ||
|nearest_unigene=Hs.150557 | |nearest_unigene=Hs.150557 | ||
+ | |num_trans=10 | ||
+ | |species=human | ||
+ | |start=70413898 | ||
+ | |start_of_center_position=70413938 | ||
+ | |strand=- | ||
+ | |transcript_name=LF345226 MA580803 | ||
+ | |tss_classification=yes | ||
|tss_id=hg_100853.1 | |tss_id=hg_100853.1 | ||
+ | |tss_score=1 | ||
+ | |uniprot_id= | ||
}} | }} |
Latest revision as of 16:26, 15 June 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 70413938 |
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End of the center position in the TSS region: | 70413939 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | LF345226 MA580803 |
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Distance: | -28 |
Num_trans: | 10 |
All_trans: | LF345226:-28 MA580803:-28 LF345227:128 MA580804:128 LF345228:450 MA580805:450 BC069431:462 AK313631:462 BC074879:487 BC074880:487 |
TATA-Box annotation
Distance to TSS: | 718 |
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Nearest PromoterID: | NM_001206 |
Entrez ID: | 687 |
Nearest Unigene: | Hs.150557 |
Nearest Refseq: | NM_001206 |
Nearest Ensembl: | ENSG00000119138 |
Gene Name: | KLF9 |
Gene Alias: | BTEB|BTEB1 |
Gene Description: | Kruppel like factor 9 |
Gene Type: | protein-coding |
CpG%: | 0.065 |
GC%: | 0.572139 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |