Difference between revisions of "TSS:Hg 232205.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|STAM1= | |STAM1= | ||
| − | |all_trans= | + | |all_trans=HGNC:1402 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
|distance=24 | |distance=24 | ||
|distance_to_tss=57 | |distance_to_tss=57 | ||
| − | |end= | + | |end=18400551 |
|end_of_center_position=18400551 | |end_of_center_position=18400551 | ||
|entrez_id=8027 | |entrez_id=8027 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_003473 | |nearest_refseq=NM_003473 | ||
|nearest_unigene=Hs.335391 | |nearest_unigene=Hs.335391 | ||
| − | |num_trans= | + | |num_trans=783 |
|species=human | |species=human | ||
| − | |start= | + | |start=18400550 |
|start_of_center_position=18400550 | |start_of_center_position=18400550 | ||
| − | |strand= | + | |strand=+ |
| − | |transcript_name=ENST00000377315.5 | + | |transcript_name=ENST00000377315.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232205.1 | |tss_id=hg_232205.1 | ||
Latest revision as of 11:05, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 18400550 |
|---|---|
| End of the center position in the TSS region: | 18400551 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000377315.5 |
|---|---|
| Distance: | 24 |
| Num_trans: | 783 |
| All_trans: | HGNC:1402 |
TATA-Box annotation
| Distance to TSS: | 57 |
|---|---|
| Nearest PromoterID: | NM_001324283 |
| Entrez ID: | 8027 |
| Nearest Unigene: | Hs.335391 |
| Nearest Refseq: | NM_003473 |
| Nearest Ensembl: | ENSG00000136738 |
| Gene Name: | calcium voltage-gated channel auxiliary subunit beta 2 |
| Gene Alias: | STAM-1|STAM1 |
| Gene Description: | signal transducing adaptor molecule |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
