Difference between revisions of "TSS:Hg 236267.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 3: | Line 3: | ||
|MT1= | |MT1= | ||
|MTD= | |MTD= | ||
| − | |all_trans= | + | |all_trans=HGNC:5141 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=-230 | |distance=-230 | ||
|distance_to_tss=1259 | |distance_to_tss=1259 | ||
| − | |end= | + | |end=72060445 |
|end_of_center_position=72060440 | |end_of_center_position=72060440 | ||
|entrez_id=4493 | |entrez_id=4493 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_175617 | |nearest_refseq=NM_175617 | ||
|nearest_unigene=Hs.744893 | |nearest_unigene=Hs.744893 | ||
| − | |num_trans= | + | |num_trans=3240 |
|species=human | |species=human | ||
| − | |start= | + | |start=72060433 |
|start_of_center_position=72060439 | |start_of_center_position=72060439 | ||
| − | |strand= | + | |strand=+ |
|tata_box=-35(TAGTATAAAAAG,-,0.00) | |tata_box=-35(TAGTATAAAAAG,-,0.00) | ||
|transcript_name=CU691288 | |transcript_name=CU691288 | ||
Latest revision as of 12:34, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 72060439 |
|---|---|
| End of the center position in the TSS region: | 72060440 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | CU691288 |
|---|---|
| Distance: | -230 |
| Num_trans: | 3240 |
| All_trans: | HGNC:5141 |
TATA-Box annotation
| Distance to TSS: | 1259 |
|---|---|
| Nearest PromoterID: | NM_001363555 |
| Entrez ID: | 4493 |
| Nearest Unigene: | Hs.744893 |
| Nearest Refseq: | NM_175617 |
| Nearest Ensembl: | ENSG00000169715 |
| Gene Name: | haptoglobin |
| Gene Alias: | MT-1E|MT-IE|MT1|MTD |
| Gene Description: | metallothionein 1E |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(TAGTATAAAAAG,-,0.00) |
