Difference between revisions of "TSS:Hg 187112.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000609884.5:238 uc061wsq.1:238 ENST00000441208.1:265 uc002xfa.2:265 AK090920:265 |chr=chr20 |cpg_percent=0.015 |distance=238 |distance_to_tss=1269...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000609884.5:238 | + | |MRD11= |
| + | |all_trans=ENST00000609884.5:238 NR_147703:238 ENST00000441208.1:265 AK090920:265 | ||
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=238 | |distance=238 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-249 |
|end=36156021 | |end=36156021 | ||
| − | |entrez_id= | + | |end_of_center_position=36156010 |
| + | |entrez_id=100130373 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | | | + | |gene_description=uncharacterized LOC100130373 |
| − | |gene_name= | + | |gene_id=100130373 |
| − | |gene_type= | + | |gene_name=uncharacterized LOC100130373 |
| − | |nearest_ensembl= | + | |gene_source=EntrezGene:100130373 |
| − | |nearest_promoter_id= | + | |gene_symbol=LOC100130373 |
| − | |nearest_refseq= | + | |gene_synonyms= |
| − | |nearest_unigene=Hs. | + | |gene_type=ncRNA |
| − | |num_trans= | + | |hgnc_mgi_id= |
| + | |nearest_ensembl= | ||
| + | |nearest_promoter_id=NR_147703 | ||
| + | |nearest_refseq=NR_147703 | ||
| + | |nearest_unigene=Hs.570339 | ||
| + | |num_trans=4 | ||
|species=human | |species=human | ||
|start=36155997 | |start=36155997 | ||
| + | |start_of_center_position=36156009 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000609884.5 | + | |transcript_name=ENST00000609884.5 NR_147703.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_187112.1 | |tss_id=hg_187112.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 01:11, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 36156009 |
|---|---|
| End of the center position in the TSS region: | 36156010 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000609884.5 NR_147703.1 |
|---|---|
| Distance: | 238 |
| Num_trans: | 4 |
| All_trans: | ENST00000609884.5:238 NR_147703:238 ENST00000441208.1:265 AK090920:265 |
TATA-Box annotation
| Distance to TSS: | -249 |
|---|---|
| Nearest PromoterID: | NR_147703 |
| Entrez ID: | 100130373 |
| Nearest Unigene: | Hs.570339 |
| Nearest Refseq: | NR_147703 |
| Nearest Ensembl: | |
| Gene Name: | uncharacterized LOC100130373 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100130373 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
