Difference between revisions of "TSS:Hg 242758.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|RAP1= | |RAP1= | ||
| − | |all_trans= | + | |all_trans=HGNC:1067 |
| − | |chr= | + | |chr=chr8 |
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=10 | |distance=10 | ||
|distance_to_tss=-4 | |distance_to_tss=-4 | ||
| − | |end= | + | |end=22165177 |
|end_of_center_position=22165168 | |end_of_center_position=22165168 | ||
|entrez_id=27342 | |entrez_id=27342 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_014504 | |nearest_refseq=NM_014504 | ||
|nearest_unigene=Hs.530053 | |nearest_unigene=Hs.530053 | ||
| − | |num_trans= | + | |num_trans=649 |
|rabex-5= | |rabex-5= | ||
|species=human | |species=human | ||
| − | |start= | + | |start=22165157 |
|start_of_center_position=22165167 | |start_of_center_position=22165167 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000520970.5 AB209590 | |transcript_name=ENST00000520970.5 AB209590 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_242758.1 | |tss_id=hg_242758.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=P13497 Q59F71 | |uniprot_id=P13497 Q59F71 | ||
}} | }} | ||
Latest revision as of 14:54, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 22165167 |
|---|---|
| End of the center position in the TSS region: | 22165168 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000520970.5 AB209590 |
|---|---|
| Distance: | 10 |
| Num_trans: | 649 |
| All_trans: | HGNC:1067 |
TATA-Box annotation
| Distance to TSS: | -4 |
|---|---|
| Nearest PromoterID: | NM_001287061 |
| Entrez ID: | 27342 |
| Nearest Unigene: | Hs.530053 |
| Nearest Refseq: | NM_014504 |
| Nearest Ensembl: | ENSG00000154710 |
| Gene Name: | bone morphogenetic protein 1 |
| Gene Alias: | RABEX5|RAP1|rabex-5 |
| Gene Description: | RAB guanine nucleotide exchange factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
