Difference between revisions of "TSS:Hg 53380.1"
From referenceTSS
| Line 32: | Line 32: | ||
|strand=- | |strand=- | ||
|tata_box=-7(CCCTTTAAACGC,+,0.00) | |tata_box=-7(CCCTTTAAACGC,+,0.00) | ||
| − | |transcript_name=NM_001135147 | + | |transcript_name=NM_001135147.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_53380.1 | |tss_id=hg_53380.1 | ||
Latest revision as of 01:52, 22 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 102345269 |
|---|---|
| End of the center position in the TSS region: | 102345270 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001135147.1 |
|---|---|
| Distance: | 13 |
| Num_trans: | 12 |
| All_trans: | NM_001135147:13 ENST00000424970.6:61 AK304274:61 NM_022154:75 ENST00000394833.6:127 AB040120:127 ENST00000514000.5:-164 AF193052:-176 BC012125:-201 ENST00000356736.5:-209 ENST00000512657.5:-209 NM_001135146:-209 |
TATA-Box annotation
| Distance to TSS: | -16 |
|---|---|
| Nearest PromoterID: | NM_001135147 |
| Entrez ID: | 64116 |
| Nearest Unigene: | Hs.288034 |
| Nearest Refseq: | NM_022154 |
| Nearest Ensembl: | ENSG00000138821 |
| Gene Name: | solute carrier family 39 member 8 |
| Gene Alias: | BIGM103|CDG2N|LZT-Hs6|PP3105|ZIP8 |
| Gene Description: | solute carrier family 39 member 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -7(CCCTTTAAACGC,+,0.00) |
