Difference between revisions of "TSS:Hg 100923.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=19480 |entrez_id=23670 |gc_percent=0.40796 |gene_alias=- |gene_description=transmembrane protein 2 |gene_name=TMEM2 |gene_type=p...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=19109 | ||
| + | |end=71749406 | ||
| + | |end_of_center_position=71749404 | ||
|entrez_id=23670 | |entrez_id=23670 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| − | |gene_alias= | + | |gene_alias=TMEM2 |
| − | |gene_description= | + | |gene_description=cell migration inducing hyaluronidase 2 |
| − | |gene_name= | + | |gene_name=CEMIP2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000135048 | |nearest_ensembl=ENSG00000135048 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_013390 | |nearest_refseq=NM_013390 | ||
|nearest_unigene=Hs.494146 | |nearest_unigene=Hs.494146 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=71749401 | ||
| + | |start_of_center_position=71749403 | ||
| + | |strand=- | ||
| + | |tata_box=74(GGCTTGAAATGG,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_100923.1 | |tss_id=hg_100923.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 15:31, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 71749403 |
|---|---|
| End of the center position in the TSS region: | 71749404 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 19109 |
|---|---|
| Nearest PromoterID: | NM_001135820 |
| Entrez ID: | 23670 |
| Nearest Unigene: | Hs.494146 |
| Nearest Refseq: | NM_013390 |
| Nearest Ensembl: | ENSG00000135048 |
| Gene Name: | CEMIP2 |
| Gene Alias: | TMEM2 |
| Gene Description: | cell migration inducing hyaluronidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 74(GGCTTGAAATGG,-,0.00) |
