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Difference between revisions of "TSS:Hg 82816.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK294572:-57 AK311707:-57 CR627389:79 ENST00000443608.5:-86 AK316007:-86 ENST00000438956.5:-97 AK299693:-97 AK311134:102 AK311194:102 AK293802:146 ENST00000420159.6:-159 ENST00000399357.7:-159 ENST00000403527.5:-159 NM_001163150:-159 NM_001163152:-159 NM_001163151:-159
+
|all_trans=HGNC:3490
 
|chr=chr7
 
|chr=chr7
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 22: Line 22:
 
|nearest_refseq=NM_004956
 
|nearest_refseq=NM_004956
 
|nearest_unigene=Hs.22634
 
|nearest_unigene=Hs.22634
|num_trans=16
+
|num_trans=2115
 
|species=human
 
|species=human
 
|start=13986347
 
|start=13986347

Latest revision as of 12:30, 22 July 2021

Basic information about the TSS


TSS ID:hg_82816.1
Species:human
Chr:chr7
TSS Classification:yes
Start:13986347
End:13986355
Strand:-
TSS Score:1
Start of the center position in the TSS region:13986351
End of the center position in the TSS region:13986352



Gene and protein annotation


Transcript_name:AK294572 AK311707
Distance:-57
GeneID:2115
HGNC/MGI_ID:HGNC:3490
UniProt_ID:B7Z2C9
Gene_name:ETS variant transcription factor 1
Gene_symbol:ETV1
Gene_synonyms:ER81
Gene_source:HGNC:3490



Transcript annotation


Transcript_name:AK294572 AK311707
Distance:-57
Num_trans:2115
All_trans:HGNC:3490



TATA-Box annotation


Distance to TSS:163
Nearest PromoterID:NM_001163152
Entrez ID:2115
Nearest Unigene:Hs.22634
Nearest Refseq:NM_004956
Nearest Ensembl:ENSG00000006468
Gene Name:ETS variant transcription factor 1
Gene Alias:ER81
Gene Description:ETS variant 1
Gene Type:protein-coding
CpG%:0.01
GC%:0.432836
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):