Difference between revisions of "TSS:Hg 92645.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:11738 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001350162 | |nearest_refseq=NM_001350162 | ||
|nearest_unigene=Hs.458316 | |nearest_unigene=Hs.458316 | ||
| − | |num_trans= | + | |num_trans=56154 |
|species=human | |species=human | ||
|start=30912998 | |start=30912998 | ||
|start_of_center_position=30913005 | |start_of_center_position=30913005 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000643185.2 | + | |transcript_name=ENST00000643185.2 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_92645.1 | |tss_id=hg_92645.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=A0A2R8Y358 | |uniprot_id=A0A2R8Y358 | ||
}} | }} | ||
Latest revision as of 16:01, 22 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 30913005 |
|---|---|
| End of the center position in the TSS region: | 30913006 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000643185.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 56154 |
| All_trans: | HGNC:11738 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001350162 |
| Entrez ID: | 56154 |
| Nearest Unigene: | Hs.458316 |
| Nearest Refseq: | NM_001350162 |
| Nearest Ensembl: | ENSG00000133863 |
| Gene Name: | testis expressed 15, meiosis and synapsis associated |
| Gene Alias: | CT42|SPGF25 |
| Gene Description: | testis expressed 15, meiosis and synapsis associated |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
