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Difference between revisions of "TSS:Mm 100063.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC145613:0 BC150803:0 AK043266:-10 AB087505:-10 BC165953:32 ENSMUST00000019006.4:-55 NM_027132:-55 ENSMUST00000106543.7:-58 NM_001347647:-58
+
|all_trans=MGI:1916852
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.08
 
|cpg_percent=0.08
Line 22: Line 22:
 
|nearest_refseq=NM_027132
 
|nearest_refseq=NM_027132
 
|nearest_unigene=Mm.101844
 
|nearest_unigene=Mm.101844
|num_trans=9
+
|num_trans=69602
 
|species=mouse
 
|species=mouse
 
|start=115334788
 
|start=115334788

Latest revision as of 10:30, 26 July 2021

Basic information about the TSS


TSS ID:mm_100063.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:115334788
End:115334849
Strand:+
TSS Score:1
Start of the center position in the TSS region:115334818
End of the center position in the TSS region:115334819



Gene and protein annotation


Transcript_name:BC145613 BC150803
Distance:0
GeneID:69602
HGNC/MGI_ID:MGI:1916852
UniProt_ID:B7ZP39
Gene_name:otopetrin 3
Gene_symbol:Otop3
Gene_synonyms:2310011E08Rik
Gene_source:MGI:1916852



Transcript annotation


Transcript_name:BC145613 BC150803
Distance:0
Num_trans:69602
All_trans:MGI:1916852



TATA-Box annotation


Distance to TSS:85
Nearest PromoterID:NM_027132
Entrez ID:69602
Nearest Unigene:Mm.101844
Nearest Refseq:NM_027132
Nearest Ensembl:ENSMUSG00000018862
Gene Name:otopetrin 3
Gene Alias:2310011E08Rik
Gene Description:otopetrin 3
Gene Type:protein-coding
CpG%:0.08
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):