Difference between revisions of "TSS:Hg 100950.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.06 |distance_to_tss=-208 |entrez_id=7763 |gc_percent=0.59204 |gene_alias=ZA20D2|ZFAND5A|ZNF216 |gene_description=zinc finger AN1-type containing 5 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ZFAND5A= | ||
| + | |ZNF216= | ||
| + | |all_trans=LF211276:-192 MA446853:-192 ENST00000376960.8:215 ENST00000376962.10:242 NM_006007:242 NM_001102421:242 NM_001102420:242 BC027707:253 BC011018:367 ENST00000487330.1:474 AF062346:479 LF345150:487 MA580727:487 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| − | |distance_to_tss=- | + | |distance=-192 |
| + | |distance_to_tss=-247 | ||
| + | |end=72365460 | ||
| + | |end_of_center_position=72365455 | ||
|entrez_id=7763 | |entrez_id=7763 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=ZA20D2 | + | |gene_alias=ZA20D2{{!}}ZFAND5A{{!}}ZNF216 |
|gene_description=zinc finger AN1-type containing 5 | |gene_description=zinc finger AN1-type containing 5 | ||
| + | |gene_id=7763 | ||
|gene_name=ZFAND5 | |gene_name=ZFAND5 | ||
| + | |gene_source=HGNC:13008 | ||
| + | |gene_symbol=ZFAND5 | ||
| + | |gene_synonyms=ZFAND5A | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:13008 | ||
|nearest_ensembl=ENSG00000107372 | |nearest_ensembl=ENSG00000107372 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001102421 |
|nearest_refseq=NM_006007 | |nearest_refseq=NM_006007 | ||
|nearest_unigene=Hs.406096 | |nearest_unigene=Hs.406096 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=72365449 | ||
| + | |start_of_center_position=72365454 | ||
| + | |strand=- | ||
| + | |transcript_name=LF211276 MA446853 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100950.1 | |tss_id=hg_100950.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=O76080 | ||
}} | }} | ||
Latest revision as of 16:29, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 72365454 |
|---|---|
| End of the center position in the TSS region: | 72365455 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF211276 MA446853 |
|---|---|
| Distance: | -192 |
| Num_trans: | 13 |
| All_trans: | LF211276:-192 MA446853:-192 ENST00000376960.8:215 ENST00000376962.10:242 NM_006007:242 NM_001102421:242 NM_001102420:242 BC027707:253 BC011018:367 ENST00000487330.1:474 AF062346:479 LF345150:487 MA580727:487 |
TATA-Box annotation
| Distance to TSS: | -247 |
|---|---|
| Nearest PromoterID: | NM_001102421 |
| Entrez ID: | 7763 |
| Nearest Unigene: | Hs.406096 |
| Nearest Refseq: | NM_006007 |
| Nearest Ensembl: | ENSG00000107372 |
| Gene Name: | ZFAND5 |
| Gene Alias: | ZA20D2|ZFAND5A|ZNF216 |
| Gene Description: | zinc finger AN1-type containing 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
