Difference between revisions of "TSS:Hg 100951.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |ZFAND5A= | ||
| + | |ZNF216= | ||
| + | |all_trans=LF211276:-9 MA446853:-9 ENST00000376960.8:405 ENST00000376962.10:432 NM_006007:432 NM_001102421:432 NM_001102420:432 BC027707:443 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance_to_tss=- | + | |distance=-9 |
| + | |distance_to_tss=-433 | ||
| + | |end=72365643 | ||
| + | |end_of_center_position=72365642 | ||
|entrez_id=7763 | |entrez_id=7763 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| − | |gene_alias=ZA20D2 | + | |gene_alias=ZA20D2{{!}}ZFAND5A{{!}}ZNF216 |
|gene_description=zinc finger AN1-type containing 5 | |gene_description=zinc finger AN1-type containing 5 | ||
| + | |gene_id=7763 | ||
|gene_name=ZFAND5 | |gene_name=ZFAND5 | ||
| + | |gene_source=HGNC:13008 | ||
| + | |gene_symbol=ZFAND5 | ||
| + | |gene_synonyms=ZFAND5A | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:13008 | ||
|nearest_ensembl=ENSG00000107372 | |nearest_ensembl=ENSG00000107372 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001102421 |
|nearest_refseq=NM_006007 | |nearest_refseq=NM_006007 | ||
|nearest_unigene=Hs.406096 | |nearest_unigene=Hs.406096 | ||
| − | |tata_box= | + | |num_trans=8 |
| + | |species=human | ||
| + | |start=72365639 | ||
| + | |start_of_center_position=72365641 | ||
| + | |strand=- | ||
| + | |tata_box=13(CCTTTTCTGGGG,+,0.00) | ||
| + | |transcript_name=LF211276 MA446853 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100951.1 | |tss_id=hg_100951.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=O76080 | ||
}} | }} | ||
Latest revision as of 16:29, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 72365641 |
|---|---|
| End of the center position in the TSS region: | 72365642 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF211276 MA446853 |
|---|---|
| Distance: | -9 |
| Num_trans: | 8 |
| All_trans: | LF211276:-9 MA446853:-9 ENST00000376960.8:405 ENST00000376962.10:432 NM_006007:432 NM_001102421:432 NM_001102420:432 BC027707:443 |
TATA-Box annotation
| Distance to TSS: | -433 |
|---|---|
| Nearest PromoterID: | NM_001102421 |
| Entrez ID: | 7763 |
| Nearest Unigene: | Hs.406096 |
| Nearest Refseq: | NM_006007 |
| Nearest Ensembl: | ENSG00000107372 |
| Gene Name: | ZFAND5 |
| Gene Alias: | ZA20D2|ZFAND5A|ZNF216 |
| Gene Description: | zinc finger AN1-type containing 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 13(CCTTTTCTGGGG,+,0.00) |
