Difference between revisions of "TSS:Mm 104387.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:2183449 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_144827 | |nearest_refseq=NM_144827 | ||
|nearest_unigene=Mm.156123 | |nearest_unigene=Mm.156123 | ||
| − | |num_trans= | + | |num_trans=217116 |
|species=mouse | |species=mouse | ||
|start=94485275 | |start=94485275 | ||
|start_of_center_position=94485278 | |start_of_center_position=94485278 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC050788 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_104387.1 | |tss_id=mm_104387.1 | ||
Latest revision as of 12:04, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 94485278 |
|---|---|
| End of the center position in the TSS region: | 94485279 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC050788 |
|---|---|
| Distance: | -29 |
| Num_trans: | 217116 |
| All_trans: | MGI:2183449 |
TATA-Box annotation
| Distance to TSS: | 32 |
|---|---|
| Nearest PromoterID: | NM_144827 |
| Entrez ID: | 217116 |
| Nearest Unigene: | Mm.156123 |
| Nearest Refseq: | NM_144827 |
| Nearest Ensembl: | ENSMUSG00000020867 |
| Gene Name: | spermatogenesis associated 20 |
| Gene Alias: | Tisp78 |
| Gene Description: | spermatogenesis associated 20 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
