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Difference between revisions of "TSS:Mm 110712.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|AW496366=
 
|AW496366=
|all_trans=ENSMUST00000238276.1:0 ENSMUST00000053451.1:0 AK017126:0 AK015077:0 AK016848:0 AK179786:110 LF233003:-293 MA468580:-293
+
|all_trans=MGI:3642578
 
|chr=chr12
 
|chr=chr12
 
|cpg_percent=0.17
 
|cpg_percent=0.17
Line 23: Line 23:
 
|nearest_refseq=NM_007481
 
|nearest_refseq=NM_007481
 
|nearest_unigene=Mm.27308
 
|nearest_unigene=Mm.27308
|num_trans=8
+
|num_trans=100036526
 
|species=mouse
 
|species=mouse
 
|start=69372443
 
|start=69372443

Latest revision as of 14:24, 26 July 2021

Basic information about the TSS


TSS ID:mm_110712.1
Species:mouse
Chr:chr12
TSS Classification:yes
Start:69372443
End:69372540
Strand:-
TSS Score:1
Start of the center position in the TSS region:69372491
End of the center position in the TSS region:69372492



Gene and protein annotation


Transcript_name:ENSMUST00000238276.1 ENSMUST00000053451.1 AK017126 AK015077 AK016848
Distance:0
GeneID:100036526
HGNC/MGI_ID:MGI:3642578
UniProt_ID:Q9CUA2 Q9CUQ2
Gene_name:predicted gene 9887
Gene_symbol:Gm9887
Gene_synonyms:
Gene_source:MGI:3642578



Transcript annotation


Transcript_name:ENSMUST00000238276.1 ENSMUST00000053451.1 AK017126 AK015077 AK016848
Distance:0
Num_trans:100036526
All_trans:MGI:3642578



TATA-Box annotation


Distance to TSS:342
Nearest PromoterID:NM_007481
Entrez ID:11845
Nearest Unigene:Mm.27308
Nearest Refseq:NM_007481
Nearest Ensembl:ENSMUSG00000044147
Gene Name:predicted gene 9887
Gene Alias:AI788669|AW496366
Gene Description:ADP-ribosylation factor 6
Gene Type:protein-coding
CpG%:0.17
GC%:0.78607
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):