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Difference between revisions of "TSS:Mm 131137.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=AK134833:487
+
|all_trans=MGI:1926224
 
|chr=chr16
 
|chr=chr16
 
|cpg_percent=0.05
 
|cpg_percent=0.05
Line 22: Line 22:
 
|nearest_refseq=NR_045799
 
|nearest_refseq=NR_045799
 
|nearest_unigene=Mm.434605
 
|nearest_unigene=Mm.434605
|num_trans=1
+
|num_trans=268859
 
|species=mouse
 
|species=mouse
 
|start=6348524
 
|start=6348524

Latest revision as of 21:52, 26 July 2021

Basic information about the TSS


TSS ID:mm_131137.1
Species:mouse
Chr:chr16
TSS Classification:no
Start:6348524
End:6348549
Strand:+
TSS Score:1
Start of the center position in the TSS region:6348536
End of the center position in the TSS region:6348537



Gene and protein annotation


Transcript_name:AK134833
Distance:487
GeneID:268859
HGNC/MGI_ID:MGI:1926224
UniProt_ID:
Gene_name:RNA binding protein, fox-1 homolog (C. elegans) 1
Gene_symbol:Rbfox1
Gene_synonyms:A2bp A2bp1 FOX1 HRNBP1
Gene_source:MGI:1926224



Transcript annotation


Transcript_name:AK134833
Distance:487
Num_trans:268859
All_trans:MGI:1926224



TATA-Box annotation


Distance to TSS:372950
Nearest PromoterID:NR_045799
Entrez ID:68238
Nearest Unigene:Mm.434605
Nearest Refseq:NR_045799
Nearest Ensembl:ENSMUSG00000101481
Gene Name:RNA binding protein, fox-1 homolog (C. elegans) 1
Gene Alias:-
Gene Description:RIKEN cDNA 1700123O21 gene
Gene Type:ncRNA
CpG%:0.05
GC%:0.547264
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):