Difference between revisions of "TSS:Mm 135192.1"
From referenceTSS
| Line 28: | Line 28: | ||
|strand=- | |strand=- | ||
|tata_box=49(CCTTTAAAACCC,+,0.00) | |tata_box=49(CCTTTAAAACCC,+,0.00) | ||
| − | |transcript_name=NM_001082546 | + | |transcript_name=NM_001082546.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_135192.1 | |tss_id=mm_135192.1 | ||
Latest revision as of 23:21, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 36367630 |
|---|---|
| End of the center position in the TSS region: | 36367631 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001082546.1 |
|---|---|
| Distance: | 54 |
| Num_trans: | 5 |
| All_trans: | NM_001082546:54 ENSMUST00000146691.1:73 ENSMUST00000138796.1:76 ENSMUST00000096089.2:-111 BC100530:-111 |
TATA-Box annotation
| Distance to TSS: | -60 |
|---|---|
| Nearest PromoterID: | NM_001082546 |
| Entrez ID: | 100034684 |
| Nearest Unigene: | Mm.383561 |
| Nearest Refseq: | NM_001082546 |
| Nearest Ensembl: | ENSMUSG00000071561 |
| Gene Name: | cystatin domain containing 5 |
| Gene Alias: | - |
| Gene Description: | cystatin domain containing 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 49(CCTTTAAAACCC,+,0.00) |
