Difference between revisions of "TSS:Hg 100985.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |ALDH-E1= | ||
| + | |ALDH1= | ||
| + | |ALDH11= | ||
| + | |HEL-9= | ||
| + | |HEL-S-53e= | ||
| + | |HEL12= | ||
| + | |PUMB1= | ||
| + | |RALDH1= | ||
| + | |all_trans=HGNC:402 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=-2 | ||
| + | |end=72953063 | ||
| + | |end_of_center_position=72953055 | ||
|entrez_id=216 | |entrez_id=216 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
| − | |gene_alias=ALDC | + | |gene_alias=ALDC{{!}}ALDH-E1{{!}}ALDH1{{!}}ALDH11{{!}}HEL-9{{!}}HEL-S-53e{{!}}HEL12{{!}}PUMB1{{!}}RALDH1 |
|gene_description=aldehyde dehydrogenase 1 family member A1 | |gene_description=aldehyde dehydrogenase 1 family member A1 | ||
| − | |gene_name=ALDH1A1 | + | |gene_id=216 |
| + | |gene_name=aldehyde dehydrogenase 1 family member A1 | ||
| + | |gene_source=HGNC:402 | ||
| + | |gene_symbol=ALDH1A1 | ||
| + | |gene_synonyms=RALDH1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:402 | ||
|nearest_ensembl=ENSG00000165092 | |nearest_ensembl=ENSG00000165092 | ||
|nearest_promoter_id=NM_000689 | |nearest_promoter_id=NM_000689 | ||
|nearest_refseq=NM_000689 | |nearest_refseq=NM_000689 | ||
|nearest_unigene=Hs.76392 | |nearest_unigene=Hs.76392 | ||
| + | |num_trans=216 | ||
| + | |species=human | ||
| + | |start=72953046 | ||
| + | |start_of_center_position=72953054 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000297785.8 ENST00000376939.5 FJ224286 AK302168 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100985.1 | |tss_id=hg_100985.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DXX3 Q5SYQ9 V9HW83 | ||
}} | }} | ||
Latest revision as of 17:55, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 72953054 |
|---|---|
| End of the center position in the TSS region: | 72953055 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000297785.8 ENST00000376939.5 FJ224286 AK302168 |
|---|---|
| Distance: | 0 |
| Num_trans: | 216 |
| All_trans: | HGNC:402 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NM_000689 |
| Entrez ID: | 216 |
| Nearest Unigene: | Hs.76392 |
| Nearest Refseq: | NM_000689 |
| Nearest Ensembl: | ENSG00000165092 |
| Gene Name: | aldehyde dehydrogenase 1 family member A1 |
| Gene Alias: | ALDC|ALDH-E1|ALDH1|ALDH11|HEL-9|HEL-S-53e|HEL12|PUMB1|RALDH1 |
| Gene Description: | aldehyde dehydrogenase 1 family member A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
