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Difference between revisions of "TSS:Mm 164409.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000096089.2:0 BC100530:0 NM_001082546:155 ENSMUST00000146691.1:174 ENSMUST00000138796.1:177
+
|all_trans=MGI:3696883
 
|chr=chr16
 
|chr=chr16
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 22: Line 22:
 
|nearest_refseq=NM_001082546
 
|nearest_refseq=NM_001082546
 
|nearest_unigene=Mm.383561
 
|nearest_unigene=Mm.383561
|num_trans=5
+
|num_trans=100034684
 
|species=mouse
 
|species=mouse
 
|start=36367724
 
|start=36367724

Latest revision as of 10:05, 27 July 2021

Basic information about the TSS


TSS ID:mm_164409.1
Species:mouse
Chr:chr16
TSS Classification:no
Start:36367724
End:36367766
Strand:-
TSS Score:1
Start of the center position in the TSS region:36367745
End of the center position in the TSS region:36367746



Gene and protein annotation


Transcript_name:ENSMUST00000096089.2 BC100530
Distance:0
GeneID:100034684
HGNC/MGI_ID:MGI:3696883
UniProt_ID:Q497J0
Gene_name:cystatin domain containing 5
Gene_symbol:Cstdc5
Gene_synonyms:BC100530
Gene_source:MGI:3696883



Transcript annotation


Transcript_name:ENSMUST00000096089.2 BC100530
Distance:0
Num_trans:100034684
All_trans:MGI:3696883



TATA-Box annotation


Distance to TSS:-175
Nearest PromoterID:NM_001082546
Entrez ID:100034684
Nearest Unigene:Mm.383561
Nearest Refseq:NM_001082546
Nearest Ensembl:ENSMUSG00000071561
Gene Name:cystatin domain containing 5
Gene Alias:-
Gene Description:cystatin domain containing 5
Gene Type:protein-coding
CpG%:0.01
GC%:0.502488
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):