Difference between revisions of "TSS:Hg 2029.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000470166.5:-38 uc057enj.1:-38 ENST00000480118.5:40 uc057enk.1:40 ENST00000373467.3:393 uc001bwh.4:393 ENST00000459874.5:420 uc057enl.1:420 DQ4268...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |DYT2= |
| + | |all_trans=HGNC:5144 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
|distance=-38 | |distance=-38 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-454 |
|end=32886042 | |end=32886042 | ||
| + | |end_of_center_position=32886037 | ||
|entrez_id=3208 | |entrez_id=3208 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=BDR2 | + | |gene_alias=BDR2{{!}}DYT2 |
|gene_description=hippocalcin | |gene_description=hippocalcin | ||
|gene_id=3208 | |gene_id=3208 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_002143 | |nearest_refseq=NM_002143 | ||
|nearest_unigene=Hs.632391 | |nearest_unigene=Hs.632391 | ||
| − | |num_trans= | + | |num_trans=3208 |
|species=human | |species=human | ||
|start=32886031 | |start=32886031 | ||
| + | |start_of_center_position=32886036 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000470166.5 | + | |transcript_name=ENST00000470166.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_2029.1 | |tss_id=hg_2029.1 | ||
Latest revision as of 06:21, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 32886036 |
|---|---|
| End of the center position in the TSS region: | 32886037 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000470166.5 |
|---|---|
| Distance: | -38 |
| Num_trans: | 3208 |
| All_trans: | HGNC:5144 |
TATA-Box annotation
| Distance to TSS: | -454 |
|---|---|
| Nearest PromoterID: | NM_002143 |
| Entrez ID: | 3208 |
| Nearest Unigene: | Hs.632391 |
| Nearest Refseq: | NM_002143 |
| Nearest Ensembl: | ENSG00000121905 |
| Gene Name: | hippocalcin |
| Gene Alias: | BDR2|DYT2 |
| Gene Description: | hippocalcin |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
