Difference between revisions of "TSS:Hg 217666.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000409120.5:-113 uc002scg.4:-113 BX647132:-113 |chr=chr2 |cpg_percent=0 |distance=-113 |distance_to_tss=-5110 |end=63443117 |entrez_id=51057 |gc_p...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |C2orf86= |
| + | |CHDTHP= | ||
| + | |FRITZ= | ||
| + | |FRTZ= | ||
| + | |all_trans=HGNC:28027 | ||
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-5110 | |distance_to_tss=-5110 | ||
|end=63443117 | |end=63443117 | ||
| + | |end_of_center_position=63443117 | ||
|entrez_id=51057 | |entrez_id=51057 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
| − | |gene_alias=BBS15 | + | |gene_alias=BBS15{{!}}C2orf86{{!}}CHDTHP{{!}}CPLANE5{{!}}FRITZ{{!}}FRTZ |
|gene_description=WD repeat containing planar cell polarity effector | |gene_description=WD repeat containing planar cell polarity effector | ||
|gene_id=51057 | |gene_id=51057 | ||
| Line 14: | Line 19: | ||
|gene_source=HGNC:28027 | |gene_source=HGNC:28027 | ||
|gene_symbol=WDPCP | |gene_symbol=WDPCP | ||
| − | |gene_synonyms=BBS15 fritz hFrtz | + | |gene_synonyms=BBS15 CPLANE5 fritz hFrtz |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:28027 | |hgnc_mgi_id=HGNC:28027 | ||
| Line 21: | Line 26: | ||
|nearest_refseq=NM_015910 | |nearest_refseq=NM_015910 | ||
|nearest_unigene=Hs.414952 | |nearest_unigene=Hs.414952 | ||
| − | |num_trans= | + | |num_trans=51057 |
|species=human | |species=human | ||
|start=63443116 | |start=63443116 | ||
| + | |start_of_center_position=63443116 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000409120.5 | + | |transcript_name=ENST00000409120.5 BX647132 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_217666.1 | |tss_id=hg_217666.1 | ||
Latest revision as of 06:59, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 63443116 |
|---|---|
| End of the center position in the TSS region: | 63443117 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000409120.5 BX647132 |
|---|---|
| Distance: | -113 |
| Num_trans: | 51057 |
| All_trans: | HGNC:28027 |
TATA-Box annotation
| Distance to TSS: | -5110 |
|---|---|
| Nearest PromoterID: | NR_122106 |
| Entrez ID: | 51057 |
| Nearest Unigene: | Hs.414952 |
| Nearest Refseq: | NM_015910 |
| Nearest Ensembl: | ENSG00000143951 |
| Gene Name: | WD repeat containing planar cell polarity effector |
| Gene Alias: | BBS15|C2orf86|CHDTHP|CPLANE5|FRITZ|FRTZ |
| Gene Description: | WD repeat containing planar cell polarity effector |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
