Difference between revisions of "TSS:Hg 101036.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=246 |entrez_id=55312 |gc_percent=0.756219 |gene_alias=RIFK |gene_description=riboflavin kinase |gene_name=RFK |gene_type=protei...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC015473:-58 KJ899117:80 KJ905495:80 BC007069:-130 ENST00000376736.6:-134 NM_018339:-134 ENST00000490113.1:141 AK002011:-213 ENST00000472900.5:-225 ENST00000479197.1:-225 AK315734:-225 AK307079:-225 ENST00000483155.5:316 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| − | |distance_to_tss= | + | |distance=-58 |
| + | |distance_to_tss=144 | ||
| + | |end=76394292 | ||
| + | |end_of_center_position=76394283 | ||
|entrez_id=55312 | |entrez_id=55312 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_018339 | |nearest_refseq=NM_018339 | ||
|nearest_unigene=Hs.37558 | |nearest_unigene=Hs.37558 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=76394272 | ||
| + | |start_of_center_position=76394282 | ||
| + | |strand=- | ||
| + | |transcript_name=BC015473 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101036.1 | |tss_id=hg_101036.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 15:34, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 76394282 |
|---|---|
| End of the center position in the TSS region: | 76394283 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC015473 |
|---|---|
| Distance: | -58 |
| Num_trans: | 13 |
| All_trans: | BC015473:-58 KJ899117:80 KJ905495:80 BC007069:-130 ENST00000376736.6:-134 NM_018339:-134 ENST00000490113.1:141 AK002011:-213 ENST00000472900.5:-225 ENST00000479197.1:-225 AK315734:-225 AK307079:-225 ENST00000483155.5:316 |
TATA-Box annotation
| Distance to TSS: | 144 |
|---|---|
| Nearest PromoterID: | NM_018339 |
| Entrez ID: | 55312 |
| Nearest Unigene: | Hs.37558 |
| Nearest Refseq: | NM_018339 |
| Nearest Ensembl: | ENSG00000135002 |
| Gene Name: | RFK |
| Gene Alias: | RIFK |
| Gene Description: | riboflavin kinase |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
