Difference between revisions of "TSS:Hg 219978.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK296518:-38 CU689974:-96 DQ894501:-96 DQ891317:-96 AY732489:-96 KJ902153:-96 |chr=chr10 |cpg_percent=0.02 |distance=-38 |distance_to_tss=29995 |end=209...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |BS69= |
| + | |MRD30= | ||
| + | |all_trans=HGNC:16966 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=29995 | |distance_to_tss=29995 | ||
|end=209989 | |end=209989 | ||
| + | |end_of_center_position=209989 | ||
|entrez_id=10771 | |entrez_id=10771 | ||
|gc_percent=0.412935 | |gc_percent=0.412935 | ||
| − | |gene_alias=BRAM1 | + | |gene_alias=BRAM1{{!}}BS69{{!}}MRD30 |
|gene_description=zinc finger MYND-type containing 11 | |gene_description=zinc finger MYND-type containing 11 | ||
|gene_id=10771 | |gene_id=10771 | ||
| Line 18: | Line 21: | ||
|hgnc_mgi_id=HGNC:16966 | |hgnc_mgi_id=HGNC:16966 | ||
|nearest_ensembl=ENSG00000015171 | |nearest_ensembl=ENSG00000015171 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001202467 |
|nearest_refseq=NM_006624 | |nearest_refseq=NM_006624 | ||
|nearest_unigene=Hs.292265 | |nearest_unigene=Hs.292265 | ||
| − | |num_trans= | + | |num_trans=10771 |
|species=human | |species=human | ||
|start=209988 | |start=209988 | ||
| + | |start_of_center_position=209988 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-73(CCCTAAAGAGAC,+,0.00) |
|transcript_name=AK296518 | |transcript_name=AK296518 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 07:24, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 209988 |
|---|---|
| End of the center position in the TSS region: | 209989 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK296518 |
|---|---|
| Distance: | -38 |
| Num_trans: | 10771 |
| All_trans: | HGNC:16966 |
TATA-Box annotation
| Distance to TSS: | 29995 |
|---|---|
| Nearest PromoterID: | NM_001202467 |
| Entrez ID: | 10771 |
| Nearest Unigene: | Hs.292265 |
| Nearest Refseq: | NM_006624 |
| Nearest Ensembl: | ENSG00000015171 |
| Gene Name: | zinc finger MYND-type containing 11 |
| Gene Alias: | BRAM1|BS69|MRD30 |
| Gene Description: | zinc finger MYND-type containing 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -73(CCCTAAAGAGAC,+,0.00) |
