Difference between revisions of "TSS:Hg 220019.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000375946.8:-141 NM_001172304:-141 NM_001172303:-141 NM_032844:-141 uc001itl.3:-141 AK074804:370 AK027719:398 ENST00000375940.8:405 ENST0000034238...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |GW= |
| + | |GWL= | ||
| + | |MAST-L= | ||
| + | |THC2= | ||
| + | |all_trans=HGNC:19042 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=141 | |distance_to_tss=141 | ||
|end=27154965 | |end=27154965 | ||
| + | |end_of_center_position=27154965 | ||
|entrez_id=84930 | |entrez_id=84930 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias=GREATWALL | + | |gene_alias=GREATWALL{{!}}GW{{!}}GWL{{!}}MAST-L{{!}}THC2 |
|gene_description=microtubule associated serine/threonine kinase like | |gene_description=microtubule associated serine/threonine kinase like | ||
|gene_id=84930 | |gene_id=84930 | ||
| Line 18: | Line 23: | ||
|hgnc_mgi_id=HGNC:19042 | |hgnc_mgi_id=HGNC:19042 | ||
|nearest_ensembl=ENSG00000120539 | |nearest_ensembl=ENSG00000120539 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001172304 |
|nearest_refseq=NM_032844 | |nearest_refseq=NM_032844 | ||
|nearest_unigene=Hs.276905 | |nearest_unigene=Hs.276905 | ||
| − | |num_trans= | + | |num_trans=84930 |
|species=human | |species=human | ||
|start=27154964 | |start=27154964 | ||
| + | |start_of_center_position=27154964 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000375946.8 | + | |transcript_name=ENST00000375946.8 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_220019.1 | |tss_id=hg_220019.1 | ||
Latest revision as of 07:24, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 27154964 |
|---|---|
| End of the center position in the TSS region: | 27154965 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000375946.8 |
|---|---|
| Distance: | -141 |
| Num_trans: | 84930 |
| All_trans: | HGNC:19042 |
TATA-Box annotation
| Distance to TSS: | 141 |
|---|---|
| Nearest PromoterID: | NM_001172304 |
| Entrez ID: | 84930 |
| Nearest Unigene: | Hs.276905 |
| Nearest Refseq: | NM_032844 |
| Nearest Ensembl: | ENSG00000120539 |
| Gene Name: | microtubule associated serine/threonine kinase like |
| Gene Alias: | GREATWALL|GW|GWL|MAST-L|THC2 |
| Gene Description: | microtubule associated serine/threonine kinase like |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
