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Difference between revisions of "TSS:Mm 49106.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|OTTMUSG00000029336=
 
|OTTMUSG00000029336=
|all_trans=ENSMUST00000159378.7:8 EU711418:-21 AK158918:-31 ENSMUST00000159335.7:-40 ENSMUST00000162034.7:40 NM_001302353:-40 NM_001302354:-40 ENSMUST00000160705.7:86 ENSMUST00000159433.7:88 AK009885:88 ENSMUST00000161400.1:102 ENSMUST00000162564.6:108 AF374476:108
+
|all_trans=MGI:3840148
 
|chr=chr6
 
|chr=chr6
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 23: Line 23:
 
|nearest_refseq=NM_001302353
 
|nearest_refseq=NM_001302353
 
|nearest_unigene=Mm.446106
 
|nearest_unigene=Mm.446106
|num_trans=13
+
|num_trans=100036521
 
|species=mouse
 
|species=mouse
 
|start=8259327
 
|start=8259327

Latest revision as of 00:58, 28 July 2021

Basic information about the TSS


TSS ID:mm_49106.1
Species:mouse
Chr:chr6
TSS Classification:yes
Start:8259327
End:8259342
Strand:+
TSS Score:1
Start of the center position in the TSS region:8259334
End of the center position in the TSS region:8259335



Gene and protein annotation


Transcript_name:ENSMUST00000159378.7
Distance:8
GeneID:100036521
HGNC/MGI_ID:MGI:3840148
UniProt_ID:E0CZ61
Gene_name:UMAP1-MVP12 associated (UMA) domain containing 1
Gene_symbol:Umad1
Gene_synonyms:Gm16039
Gene_source:MGI:3840148



Transcript annotation


Transcript_name:ENSMUST00000159378.7
Distance:8
Num_trans:100036521
All_trans:MGI:3840148



TATA-Box annotation


Distance to TSS:47
Nearest PromoterID:NM_001302354
Entrez ID:100036521
Nearest Unigene:Mm.446106
Nearest Refseq:NM_001302353
Nearest Ensembl:ENSMUSG00000089862
Gene Name:UMAP1-MVP12 associated (UMA) domain containing 1
Gene Alias:Gm16039
Gene Description:UMAP1-MVP12 associated (UMA) domain containing 1
Gene Type:protein-coding
CpG%:0.105
GC%:0.691542
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):