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Difference between revisions of "TSS:Mm 76557.1"

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Line 2: Line 2:
 
|CELTIX1=
 
|CELTIX1=
 
|Ptpn13ip=
 
|Ptpn13ip=
|all_trans=AF084259:-31 NM_001377016:-50 NM_012047:-50 NM_001377017:-50 NM_001377013:-50 NR_165043:-50 NR_165044:-50 NR_165045:-50 NM_001377014:-50 NM_001377015:-50 AK142758:-53 ENSMUST00000034085.7:-72 AK138934:-72 ENSMUST00000135471.1:95 AK160638:151 BC166008:154
+
|all_trans=MGI:1349766
 
|chr=chr8
 
|chr=chr8
 
|cpg_percent=0.17
 
|cpg_percent=0.17
Line 24: Line 24:
 
|nearest_refseq=NM_012047
 
|nearest_refseq=NM_012047
 
|nearest_unigene=Mm.5400
 
|nearest_unigene=Mm.5400
|num_trans=16
+
|num_trans=26992
 
|species=mouse
 
|species=mouse
 
|start=88362108
 
|start=88362108

Latest revision as of 11:05, 28 July 2021

Basic information about the TSS


TSS ID:mm_76557.1
Species:mouse
Chr:chr8
TSS Classification:yes
Start:88362108
End:88362122
Strand:-
TSS Score:1
Start of the center position in the TSS region:88362115
End of the center position in the TSS region:88362116



Gene and protein annotation


Transcript_name:AF084259
Distance:-31
GeneID:26992
HGNC/MGI_ID:MGI:1349766
UniProt_ID:
Gene_name:bromodomain containing 7
Gene_symbol:Brd7
Gene_synonyms:BP75 CELTIX1 bromodomain_protein_75_kDa
Gene_source:MGI:1349766



Transcript annotation


Transcript_name:AF084259
Distance:-31
Num_trans:26992
All_trans:MGI:1349766



TATA-Box annotation


Distance to TSS:76
Nearest PromoterID:NM_012047
Entrez ID:26992
Nearest Unigene:Mm.5400
Nearest Refseq:NM_012047
Nearest Ensembl:ENSMUSG00000031660
Gene Name:bromodomain containing 7
Gene Alias:BP75|CELTIX1|Ptpn13ip
Gene Description:bromodomain containing 7
Gene Type:protein-coding
CpG%:0.17
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):