Difference between revisions of "TSS:Hg 226736.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AF254115:-20 NM_138281:-22 BC016145:-22 ENST00000240306.4:-46 uc002ipv.4:-46 ENST00000505318.2:98 uc060hdz.1:98 AB527463:237 BT006978:237 KJ891055:237 E...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |DLX7= |
| + | |DLX8= | ||
| + | |DLX9= | ||
| + | |OFC15= | ||
| + | |all_trans=HGNC:2917 | ||
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=-20 | |distance=-20 | ||
| − | |distance_to_tss= | + | |distance_to_tss=36 |
|end=49969232 | |end=49969232 | ||
| + | |end_of_center_position=49969226 | ||
|entrez_id=1748 | |entrez_id=1748 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=BP1 | + | |gene_alias=BP1{{!}}DLX7{{!}}DLX8{{!}}DLX9{{!}}OFC15 |
|gene_description=distal-less homeobox 4 | |gene_description=distal-less homeobox 4 | ||
|gene_id=1748 | |gene_id=1748 | ||
| Line 21: | Line 26: | ||
|nearest_refseq=NM_001934 | |nearest_refseq=NM_001934 | ||
|nearest_unigene=Hs.591167 | |nearest_unigene=Hs.591167 | ||
| − | |num_trans= | + | |num_trans=1748 |
|species=human | |species=human | ||
|start=49969219 | |start=49969219 | ||
| + | |start_of_center_position=49969225 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AF254115 | |transcript_name=AF254115 | ||
Latest revision as of 09:11, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 49969225 |
|---|---|
| End of the center position in the TSS region: | 49969226 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AF254115 |
|---|---|
| Distance: | -20 |
| Num_trans: | 1748 |
| All_trans: | HGNC:2917 |
TATA-Box annotation
| Distance to TSS: | 36 |
|---|---|
| Nearest PromoterID: | NM_138281 |
| Entrez ID: | 1748 |
| Nearest Unigene: | Hs.591167 |
| Nearest Refseq: | NM_001934 |
| Nearest Ensembl: | ENSG00000108813 |
| Gene Name: | distal-less homeobox 4 |
| Gene Alias: | BP1|DLX7|DLX8|DLX9|OFC15 |
| Gene Description: | distal-less homeobox 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
