Difference between revisions of "TSS:Mm 99434.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:95832 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_008175 | |nearest_refseq=NM_008175 | ||
|nearest_unigene=Mm.1568 | |nearest_unigene=Mm.1568 | ||
| − | |num_trans= | + | |num_trans=14824 |
|species=mouse | |species=mouse | ||
|start=102432555 | |start=102432555 | ||
| Line 29: | Line 29: | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000135517.1 | |transcript_name=ENSMUST00000135517.1 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_99434.1 | |tss_id=mm_99434.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 19:26, 28 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 102432568 |
|---|---|
| End of the center position in the TSS region: | 102432569 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000135517.1 |
|---|---|
| Distance: | 204 |
| Num_trans: | 14824 |
| All_trans: | MGI:95832 |
TATA-Box annotation
| Distance to TSS: | 2061 |
|---|---|
| Nearest PromoterID: | NM_008175 |
| Entrez ID: | 14824 |
| Nearest Unigene: | Mm.1568 |
| Nearest Refseq: | NM_008175 |
| Nearest Ensembl: | ENSMUSG00000034708 |
| Gene Name: | granulin |
| Gene Alias: | GP88|PCDGF|PEPI|Pgrn|epithelin |
| Gene Description: | granulin |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
