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Difference between revisions of "TSS:Mm 99573.1"

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Line 2: Line 2:
 
|CRFR1=
 
|CRFR1=
 
|Crhr=
 
|Crhr=
|all_trans=AK144430:0 ENSMUST00000093925.4:27 NM_001313929:-30 NM_007762:-30 NM_001313928:-30 AK158806:54 X72305:214 BC105673:226 BC103675:226 BC104735:226 BC105675:226 AF483484:244 AF483485:244 FJ668671:244 AB375515:244
+
|all_trans=MGI:88498
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.075
 
|cpg_percent=0.075
Line 24: Line 24:
 
|nearest_refseq=NM_007762
 
|nearest_refseq=NM_007762
 
|nearest_unigene=Mm.1892
 
|nearest_unigene=Mm.1892
|num_trans=15
+
|num_trans=12921
 
|species=mouse
 
|species=mouse
 
|start=104132810
 
|start=104132810

Latest revision as of 19:29, 28 July 2021

Basic information about the TSS


TSS ID:mm_99573.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:104132810
End:104132828
Strand:+
TSS Score:1
Start of the center position in the TSS region:104132819
End of the center position in the TSS region:104132820



Gene and protein annotation


Transcript_name:AK144430
Distance:0
GeneID:12921
HGNC/MGI_ID:MGI:88498
UniProt_ID:
Gene_name:corticotropin releasing hormone receptor 1
Gene_symbol:Crhr1
Gene_synonyms:CRF-R1alpha CRF1R CRFR1 CRF_1_receptor
Gene_source:MGI:88498



Transcript annotation


Transcript_name:AK144430
Distance:0
Num_trans:12921
All_trans:MGI:88498



TATA-Box annotation


Distance to TSS:38
Nearest PromoterID:NM_001313929
Entrez ID:12921
Nearest Unigene:Mm.1892
Nearest Refseq:NM_007762
Nearest Ensembl:ENSMUSG00000018634
Gene Name:corticotropin releasing hormone receptor 1
Gene Alias:CRF1R|CRFR1|Crhr
Gene Description:corticotropin releasing hormone receptor 1
Gene Type:protein-coding
CpG%:0.075
GC%:0.716418
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):